AChannel_Hoffman97 | From: Hoffman, D., Magee, J.C., Colbert, C.M., and Johnston, D. Potassium channel regulation of signal propagation in dendrites of hippocampal pyramidal neurons. Nature 387:869-875 (1997) |
AChannel_Korngreen02 | From: Korngreen A, Sakmann B.Voltage-gated K+ channels in layer 5 neocortical pyramidal neurones from young rats: subtypes and gradients. J Physiol. 2000 Jun 15;525 Pt 3:621-39 |
ActiveCaChannel | Ion channel that contributes to the intracellular calcium concentration |
ActiveChannel | Base Class for all active ionic channels using ion gates |
Advancable | Base class for all objects to simulate |
AhGate_Hoffman97 | From: Hoffman, D., Magee, J.C., Colbert, C.M., and Johnston, D. Potassium channel regulation of signal propagation in dendrites of hippocampal pyramidal neurons. Nature 387:869-875 (1997) |
AHP_Channel | Base Class for all active ionic channels using ion gates |
AlGate_Korngreen02 | From: Korngreen A, Sakmann B.Voltage-gated K+ channels in layer 5 neocortical pyramidal neurones from young rats: subtypes and gradients. J Physiol. 2000 Jun 15;525 Pt 3:621-39 |
AmGate_Hoffman97 | From: Hoffman, D., Magee, J.C., Colbert, C.M., and Johnston, D. Potassium channel regulation of signal propagation in dendrites of hippocampal pyramidal neurons. Nature 387:869-875 (1997) |
AnalogInputNeuron | An object which outputs a predefined analog signal |
AnalogNeuron | Base class for all analog neurons |
AnalogNeuron::Queue | Queue for delaying the output of analog synapses |
AnalogSynapse | Base class of all analog synapses |
AnalogTeacher | Teacher for a pool of analog neurons (all teached with the same signal) |
AnGate_Korngreen02 | From: Korngreen A, Sakmann B.Voltage-gated K+ channels in layer 5 neocortical pyramidal neurones from young rats: subtypes and gradients. J Physiol. 2000 Jun 15;525 Pt 3:621-39 |
bNACNeuron | Conductance based spiking neuron ... |
bNACOUNeuron | Conductance based spiking neuron ... |
CaChannel_Yamada98 | From: Yamada, Koch and Adams: Multiple Channels and Calcium Dynamics, Editors: Koch, Segev, MIT Press 1998) |
cACNeuron | Conductance based spiking neuron ... |
cACOUNeuron | Conductance based spiking neuron ... |
CaGate_Yamada98 | From: Yamada, Koch and Adams: Multiple Channels and Calcium Dynamics, Editors: Koch, Segev, MIT Press 1998) |
CALChannel_Destexhe98 | From: Destexhe A, Contreras D, Steriade M. Mechanisms underlying the synchronizing action of corticothalamic feedback through inhibition of thalamic relay cells. J Neurophysiol. 1998 Feb;79(2):999-1016 |
CALhGate_Destexhe98 | From: Destexhe A, Contreras D, Steriade M. Mechanisms underlying the synchronizing action of corticothalamic feedback through inhibition of thalamic relay cells. J Neurophysiol. 1998 Feb;79(2):999-1016 |
CALmGate_Destexhe98 | From: Destexhe A, Contreras D, Steriade M. Mechanisms underlying the synchronizing action of corticothalamic feedback through inhibition of thalamic relay cells. J Neurophysiol. 1998 Feb;79(2):999-1016 |
CbHHOuINeuron | A single compartment neuron with an arbitrary number of channels, current supplying synapses and spike template |
CbHHOuNeuron | A single compartment neuron with an arbitrary number of channels, current supplying synapses and spike template |
CbNeuron | A single compartment neuron with an arbitrary number of channels and current supplying synapses |
CbNeuronSt | A single compartment neuron with an arbitrary number of channels, current supplying synapses and spike template |
CbStOuNeuron | A single compartment neuron with an arbitrary number of channels, current supplying synapses and spike template |
ConcIonGate | Generic first order kinitics ion concentration dependend ion gate |
csimAnalogInputClass | Base class for all analog input channel receiving classes like AnalogInputNeuron or AnalogTeacher |
csimClassInfo | Holds information about a class like name, description and field informations |
csimClassInfoDB | A database/dictionary of all classes with accessable fields |
csimError | Class for managing formated error messages |
csimFieldInfo | Holds information about a field of a class |
csimInputChannel | Structure representing an analog or spiking signal channel |
csimInputClass | Base class for all input channel receiving classes like AnalogInputNeuron or SpikingInputNeuron |
csimList< T, inc > | Template class for storing an array of pointers |
csimRecorder | Implements an object which can record fields from other objects |
csimRecorder::RecField | Stores information about a field to recored from |
csimSpikingInputClass | Base class for all spiking input channel receiving classes like SpikingInputNeuron or SpikingTeacher |
dNACNeuron | Conductance based spiking neuron ... |
dNACOUNeuron | Conductance based spiking neuron ... |
DynamicAnalogSynapse | Implements dynamic analog synapses |
DynamicSpikingCbSynapse | A dynamic spiking synapse (see Markram et al, 1998) |
DynamicSpikingSynapse | A dynamic spiking synapse (see Markram et al, 1998) |
DynamicStdpSynapse | Base class for all dynamic spiking synapses with spike time dependent plasticity (STDP) |
ExtInputNeuron | Implements an external (analog) input neuron |
ExtOutLifNeuron | A LIF neuron which writes its output to some external program |
ExtOutLinearNeuron | A linear neuron which writes its output to some external program |
ExtOutSigmoidalNeuron | A sigmoidal neuron which writes its output to some external program |
Forceable | Class Teacher) to produce a given target output |
GVD_cT_Gate | A generic voltage dependent ion gate with constant time constant |
GVD_Gate | A generic voltage dependent ion gate |
HChannel_Stuart98 | From: Stuart G, Spruston N. Determinants of voltage attenuation in neocortical pyramidal neuron dendrites. J Neurosci. 1998 May 15;18(10):3501-10 |
HH_h_Gate | H gate for the fast HH sodium Na channel |
HH_K_Channel | Hodgkin and Huxley fast potassium (K) channel for AP generation |
HH_m_Gate | M gate for the fast HH sodium (Na) channel |
HH_n_Gate | N gate for the fast HH potassium (K) channel |
HH_Na_Channel | Hodgkin and Huxley fast sodium (Na) channel for AP generation |
HHNeuron | Conductance based spiking neuron using the HH squid modell |
HnGate_Stuart98 | From: Stuart G, Spruston N. Determinants of voltage attenuation in neocortical pyramidal neuron dendrites. J Neurosci. 1998 May 15;18(10):3501-10 |
HVACAChannel_Brown93 | See also: Seamans JK, Durstewitz D, Christie BR, Stevens CF, Sejnowski TJ. Dopamine D1/D5 receptor modulation of excitatory synaptic inputs to layer V prefrontal cortex neurons. Proc Natl Acad Sci U S A. 2001 Jan 2;98(1):301-6 |
HVACAuGate_Brown93 | See also: Seamans JK, Durstewitz D, Christie BR, Stevens CF, Sejnowski TJ. Dopamine D1/D5 receptor modulation of excitatory synaptic inputs to layer V prefrontal cortex neurons. Proc Natl Acad Sci U S A. 2001 Jan 2;98(1):301-6 |
HVACAvGate_Brown93 | See also: Seamans JK, Durstewitz D, Christie BR, Stevens CF, Sejnowski TJ. Dopamine D1/D5 receptor modulation of excitatory synaptic inputs to layer V prefrontal cortex neurons. Proc Natl Acad Sci U S A. 2001 Jan 2;98(1):301-6 |
IonBuffer | An ion buffer handling the ion concentration of multiple ionic input currents and outward pump |
IonChannel | Base class for all ionic channels |
IonGate | Generic first order kinetics ion gate template |
KCAChannel_Mainen96 | From: Mainen ZF, Sejnowski TJ. Influence of dendritic structure on firing pattern in model neocortical neurons. Nature. 1996 Jul 25;382(6589):363-6 |
KCAnGate_Mainen96 | From: Mainen ZF, Sejnowski TJ. Influence of dendritic structure on firing pattern in model neocortical neurons. Nature. 1996 Jul 25;382(6589):363-6 |
KChannel_Korngreen02 | From: Korngreen A, Sakmann B.Voltage-gated K+ channels in layer 5 neocortical pyramidal neurones from young rats: subtypes and gradients. J Physiol. 2000 Jun 15;525 Pt 3:621-39 |
KDnGate_Traub91 | From: Traub RD, Miles R (1991): Neuronal Networks of the Hippocampus, Cambridge University Press, New York |
KlGate_Korngreen02 | From: Korngreen A, Sakmann B.Voltage-gated K+ channels in layer 5 neocortical pyramidal neurones from young rats: subtypes and gradients. J Physiol. 2000 Jun 15;525 Pt 3:621-39 |
KnGate_Korngreen02 | From: Korngreen A, Sakmann B.Voltage-gated K+ channels in layer 5 neocortical pyramidal neurones from young rats: subtypes and gradients. J Physiol. 2000 Jun 15;525 Pt 3:621-39 |
LifNeuron | A leaky-integrate-and-fire (I&F) neuron |
LinearNeuron | A linear neuron: simply summing up the inputs |
MChannel_Mainen96 | From: Mainen ZF, Sejnowski TJ. Influence of dendritic structure on firing pattern in model neocortical neurons. Nature. 1996 Jul 25;382(6589):363-6 |
MChannel_Wang98 | From: Wang, H.-S., Pan, Z., Shi, W., Brown, B. S., Wymore, R.S., Cohen, I. S., Dixon, J. E. and McKinnon, D. (1998) KCNQ2 and KCNQ3Potassium Channel Subunits: Molecular Correlates of the M-Channel. Science, 282, 1890-1893 |
MembranePatch | A a patch of membrane with an arbitrary number of channels and current supplying synapses |
MembranePatchSimple | A a path of membrane with an arbitrary number of channels and current supplying synapses |
MexNetwork | In addition to the class Network it provides specific methods for the Matlab MEX interface |
MexRecorder | Alias for Recorder for backwards compatibility |
MmGate_Wang98 | From: Wang, H.-S., Pan, Z., Shi, W., Brown, B. S., Wymore, R.S., Cohen, I. S., Dixon, J. E. and McKinnon, D. (1998) KCNQ2 and KCNQ3Potassium Channel Subunits: Molecular Correlates of the M-Channel. Science, 282, 1890-1893 |
MnGate_Mainen96 | From: Mainen ZF, Sejnowski TJ. Influence of dendritic structure on firing pattern in model neocortical neurons. Nature. 1996 Jul 25;382(6589):363-6 |
MpGate_Mainen96orig | From: Mainen ZF, Joerges J, Huguenard JR, Sejnowski TJ.,A model of spike initiation in neocortical pyramidal neurons.,Neuron. 1995 Dec;15(6):1427-39 |
NAhGate_Traub91 | From: Traub RD, Miles R (1991): Neuronal Networks of the Hippocampus, Cambridge University Press, New York |
NAmGate_Traub91 | From: Traub RD, Miles R (1991): Neuronal Networks of the Hippocampus, Cambridge University Press, New York |
NeedsPostSpikeSynapse | Interface for synapses which will receive a postsynaptic spike |
Network | Container class for a network of neurons and synapses |
Network::event | Structure for memory management of the event/spike driven part of the simulation |
Neuron | Base class of all neurons |
NPChannel_McCormick02 | Methods in Neuronal Modeling: From Ions to Networks, 2nd edition, Christof Koch and Idan Segev, eds, MIT Press, Cambridge, Mass., 1998, |
NPmGate_McCormick92 | Methods in Neuronal Modeling: From Ions to Networks, 2nd edition, Christof Koch and Idan Segev, eds, MIT Press, Cambridge, Mass., 1998, |
Recorder | Records fields from arbitrary objects during simulation |
SICChannel_Maciokas02 | From: Maciokas, J., Goodman, P., Kenyon, J., Accurate Dynamical Model of Interneuronal GABAergic Channel Physiologies |
SIChGate_Maciokas02 | From: Maciokas, J., Goodman, P., Kenyon, J., Accurate Dynamical Model of Interneuronal GABAergic Channel Physiologies |
SICmGate_Maciokas02 | From: Maciokas, J., Goodman, P., Kenyon, J., Accurate Dynamical Model of Interneuronal GABAergic Channel Physiologies |
SigmoidalNeuron | An analog neuron with a sigmoidal activation function |
SpikingInputNeuron | A spiking neuron which emits a predefined spike train |
SpikingNeuron | Base class for all spiking neurons, i.e. spike emitting objects |
SpikingSynapse | Base class of all spike transmitting synapses |
SpikingTeacher | Teacher for a pool of spiking neurons |
StaticAnalogCbSynapse | Its input is the synaptic conductance and its output is the PSC |
StaticAnalogSynapse | A synapse which transmitts analog values (no dynamics) |
StaticSpikingCbSynapse | A static spike transmitting synapse (no synaptic dynamics) |
StaticSpikingSynapse | A static spike transmitting synapse (no synaptic dynamics) |
StaticStdpSynapse | A STDP synapse with no synaptic short time dynamics, i.e. no depression and no facilitation |
StdpSynapse | Base class for all spiking synapses with spike time dependent plasticity (STDP) |
Synapse | Base class of all synapses |
SynapseTarget | Base class for all classes which are potential synaptic targets |
SynapticChannel | IonChannel which transforms spikes into conductance changes |
Teacher | Container class for a set of objects subject to teacher forcing |
VIonGate | Generic first order kinitics voltage dependend ion gate |