| odeiv::AdaptiveStepSolver | |
| AdvanceInfo | |
| AdvancePhase | |
| AdvancePhase::None | |
| AdvancePhase::One | |
| AdvancePhase::SpikeDriven | |
| AdvancePhase::Two | |
| aEIFCondAlphaNeuron | |
| aEIFNeuron | A current based aEIF (adaptive Exponential Integrate and Fire) neuron |
| aEIFNeuronBase | An aEIF (adaptive Exponential Integrate and Fire) neuron |
| AlphaFunctionSpikeResponse | |
| AlphaInfiniteSpikeResponse | |
| AnalogDelayObject | |
| AnalogDelayObjectMap | |
| AnalogInputNeuron | |
| AnalogLevelBasedInputNeuron | Input neuron where the analog input signal is composed of muliple constant levels with different durations |
| AnalogMessageDispatcher | |
| AnalogMessageDispatcherVector | |
| AnalogMessageDispatcherVectorImpl< T > | |
| AnalogPointNeuron | This class implements a neuron which just adds up all its inputs (synapses and analog messages) in a linear fashion |
| AnalogRecorder | |
| AnalogSynapse | Synapse for transmission of analog values |
| AttributeConnObjectValueGenerator | Value generator which works for populations of class AugmentedSpatialPopulation and classes derived from it |
| AttributePopObjectValueGenerator | Value generator which works for populations of class AugmentedSpatialPopulation and classes derived from it |
| AugmentedConnectionDecisionPredicate | Predicate which works for populations of class AugmentedSpatialPopulation and classes derived from it |
| AugmentedSpatialPopulation | |
| BernoulliDistribution | Bernoulli distribution |
| BinomialDistribution | Binomial distribution |
| BndGammaDistribution | Bounded Gamma distribution (similar to the bndgamma in the circuit toolbox) |
| BndNormalDistribution | Bounded Normal distribution (similar to the bndnormal in the circuit toolbox) |
| CauchyDistribution | Cauchy distribution |
| CbaEIFNeuron | A conductance based aEIF (adaptive Exponential Integrate and Fire) neuron |
| CbExIzhiNeuron | A conductance based 'extended' Izhikevich neuron |
| CbIzhiNeuron | A conductance based Izhikevich neuron |
| CbLifNeuron | A leaky-integrate-and-fire (I&F) neuron |
| CbStaticAnalogSynapse | |
| CircularQueue< T > | Circular queue implementation |
| ClippedDistribution | Uniform distributed integers in the range [a,b] |
| CompositeNeuron< BaseNeuron > | |
| ConductanceBasedAnalogSynapse | |
| ConductanceInputTarget | |
| ConnectionDecisionPredicate | Binary predicate to decide on a connection between an object from a source population and an object in the destination population |
| ConnectionDecisionPredicateSpecialization< S, D > | Template which allows type-safe specialization of ConnectionDecisionPredicate's for certain classes of SimObjectPopulations |
| ConnectionIterator | Interface for iterating over connections to be made between populations of sim objects |
| ConnectionsProjection | Class for making connections between populations of SimObjects |
| ConnObjectFactory | |
| ConnObjectFactory::FieldGeneratorPair | |
| ConnObjectValueGenerator | Customizable generator for connecting SimObject (synapses) field values |
| ConnObjectValueGeneratorSpecialization< S, D > | Class exposed to python where user defined value genrators can be derived |
| ConstantNumber | A "distribution" which always returns a specified value |
| PCSIM::ConstructionException | |
| CuboidGridObjectPopulation | SpatialSimObjectPopulation class with SimObject's on an integer grid in 3D |
| CuboidIntegerGrid3D | Set of 3D points which have integer coordinates and are within some cuboid subspace |
| CurrentBasedAnalogSynapse | |
| CurrentInputTarget | |
| CycleAdvanceJob | |
| DAModStdpDynamicCondExpSynapse | |
| DAModStdpDynamicCurrExpSynapse | |
| DAModStdpSquarePulseSynapse | |
| DAModStdpStaticCondExpSynapse | |
| DAModulatedDynamicStdpSynapse | |
| DAModulatedStaticStdpSynapse | |
| DARecvCbLifNeuron | |
| DARecvLifNeuron | |
| DARecvLinearPoissonNeuron | |
| DegreeDistributionConnections | This ConnectionIterator generates connections such the either the in or out degree of a SimObject in the population follows a given probability distribution |
| DelayCond | |
| DelayCondAndSyn | |
| DistIncomingAnalogSources2BufPosMap | |
| DistIncomingAnalogSources2BufPosMap::type< T > | |
| DistributedAnalogMessageCreator | |
| DistributedAnalogMessageDispatcher | |
| DistributedCycledAnalogMessagesDispatchJob | |
| DistributedCycledAnalogMsgDispatcher | Interface that is implemented by analog message dispatcher which dispatch messages every sim cycle (= min delay steps) |
| DistributedIncomingAnalogMsgDispatcher | |
| DistributedIncomingSpikeScheduler | Abstract class providing the interface for incoming spike schedulers |
| DistributedMultiThreadNetwork | Network which encapsulates a distributed multi-threaded simulation |
| DistributedNetwork | Network holding the common functionalities for distributed simulations |
| DistributedNetwork::ConnectInfo | |
| DistributedOutgoingAnalogMsgDispatcher | |
| DistributedSimEngine | Simulation Engine for a distributed simulation |
| DistributedSingleThreadNetwork | Network which encapsulates a distributed single-threaded simulation |
| DistributedSpikeScheduler | Spike scheduler for multi-node distributed spike exchange |
| DistributedSyncWiringMethod | Implementation of a WiringMethod which allows fast wiring of populations which span multiple MPI nodes |
| DistributionStrategy | |
| DistributionStrategy::DistributionFunction | |
| DistributionStrategy::EngineListStrategy | |
| DistributionStrategy::ModuloOverGlobalEngines | |
| DistributionStrategy::ModuloOverLocalEngines | |
| DistributionStrategy::ModuloOverLocalEnginesOnOneNode | |
| DistributionStrategy::RandomOverGlobalEngines | |
| DistributionStrategy::RandomOverLocalEngines | |
| DistributionStrategy::RankListStrategy | |
| DopamineReceiver | |
| DoubleExponentialSpikeResponse | |
| DynamicCondAlphaSynapse | |
| DynamicCondDoubleExpSynapse | |
| DynamicCondExpSynapse | |
| DynamicCurrAlphaSynapse | |
| DynamicCurrDoubleExpSynapse | |
| DynamicCurrExpSynapse | |
| DynamicGABAAlphaSynapse | |
| DynamicGABADoubleExpSynapse | |
| DynamicGABAExpSynapse | |
| DynamicGlutamateAlphaSynapse | |
| DynamicGlutamateDoubleExpSynapse | |
| DynamicGlutamateExpSynapse | |
| DynamicHomeostaticCurrentSynapse | |
| DynamicHomeostaticSynapse | |
| DynamicIzhiStdpSynapse | NEEDS TO BE TESTED |
| DynamicNMDAAlphaSynapse | |
| DynamicNMDADoubleExpSynapse | |
| DynamicNMDAExpSynapse | |
| DynamicNonLinGABAExpSynapse | |
| DynamicSpikingSynapse | |
| DynamicStdpCondExpSynapse | |
| DynamicStdpSynapse | Dynamic synapse implementing STDP plasticity |
| EuclideanDistanceRandomConnections | Implementation of a ConnectionIterator which generates connections which a connection probability which depends on the spatial distance between SimObject's |
| EuclidianDistanceConnectionPredicate | Predicate for generating connections which a connection probability which depends on the spatial distance between SimObject's |
| EvLifNeuron | |
| PCSIM::Exception | |
| ExIzhiNeuron | A current based 'extended' Izhikevich neuron |
| ExIzhiNeuronBase | An extended Izhikevich neuron |
| ExponentialDecaySpikeResponse | |
| ExponentialDistribution | Exponential distribution |
| FacetsHWDepressionExpSynapse | |
| FacetsHWDepressionSynapse | |
| FacetsHWFacilitationExpSynapse | |
| FacetsHWFacilitationSynapse | |
| FamilyConnObjectValueGenerator | Value generator which works for populations of class SpatialFamilyPopulation and classes derived from it |
| FamilyIdConnectionDecisionPredicate | Predicate which works for populations of class SpatialFamilyPopulation and classes derived from it |
| FamilyPopObjectFactory | Value generator which works for populations of class SpatialFamilyPopulation and classes derived from it |
| Field | Holds information about a field of a SimObject |
| FieldRegistry | Holds information about a class like name, description and field informations |
| FiniteSpikeResponse | |
| odeiv::FixedStepSolver | |
| GABA_BResponse | |
| GABA_BResponseNest | |
| GABA_BResponseODE | |
| GABA_BSynapse | |
| GABA_BSynapseNest | |
| GABA_BSynapseODE | |
| Gamma2Distribution | Gamma distribution with 2 parameters (additional scaling parameter) |
| GammaDistribution | Gamma distribution |
| GaussianNoise | |
| GenericConductanceBasedSpikingSynapse< Response > | |
| GenericCurrentBasedSpikingSynapse< Response > | |
| GenericDAModulatedSTDPSynapse< BaseSyn > | Synapse implementing dopamine modulated STDP plasticity (Izhikevich, 2007) |
| GenericDynamicSpikingSynapse< SpikeResponse > | |
| GenericEachPairStdpSynapse< BaseSyn > | |
| GenericFacetsHWDepressionSynapse< SpikeResponse > | |
| GenericFacetsHWFacilitationSynapse< SpikeResponse > | |
| GenericFroemkeDanStdpSynapse< BaseSyn > | STDP due to Froemke and Dan Nature 416 (3/2002) |
| GenericGABASynapse< Response > | Synapse with GABA-A and GABA-B Receptors |
| GenericGlutamateSynapse< Response > | Synapse with AMPA and NMDA Receptors |
| GenericHomeostaticSynapse< BaseSyn > | |
| GenericNMDASynapse< Response > | Synapse implementing NMDA Receptors which depend on the postsynaptic Membrane potential and |
| GenericNonLinGABASynapse< Response > | Synapse with GABA-A and GABA-B Receptors |
| GenericOnePairStdpSynapse< BaseSyn > | |
| GenericStaticAnalogSynapse< base > | |
| GenericStaticSpikingSynapse< Response > | A static spike transmitting synapse (no synaptic dynamics) |
| GeometricDistribution | Geometric distribution |
| GlobalSingleTargetDelayMap | |
| odeiv::GslStepper | |
| odeiv::GslStepperType | |
| HHINeuron | |
| HHNeuron | Conductance based spiking neuron using Traubs modified HH model with OU Noise |
| HHNeuronTraubMiles91 | Conductance based spiking neuron using Traubs modified HH model |
| HomDynGlutamateExpSynapse | |
| IDhasNode | |
| IncomingSpikeSchedulerThreadPoolJob | Thread Pool Job for multi-thread incoming spike scheduling |
| InfiniteSpikeResponse | |
| IzhiNeuron | A current based Izhikevich neuron |
| IzhiNeuronBase | An Izhikevich neuron |
| LaggedFibonacci1279 | |
| LaggedFibonacci19937 | |
| LaggedFibonacci2281 | |
| LaggedFibonacci23209 | |
| LaggedFibonacci3217 | |
| LaggedFibonacci4423 | |
| LaggedFibonacci44497 | |
| LaggedFibonacci607 | |
| LaggedFibonacci9689 | |
| LateralDelayCondAndSyn | |
| LateralEuclidianDistanceConnectionPredicate | Predicate for generating connections which a connection probability which depends on the lateral distance between SimObjects |
| LateralLongRangeOrientationConnectionPredicate | Predicate for generating retinotopic connections (with orientation tuning) |
| LIFCondAlphaNeuron | |
| LIFCondExpNeuron | |
| LIFCurrAlphaNeuron | |
| LIFCurrExpNeuron | |
| LifNeuron | A leaky-integrate-and-fire (I&F) neuron |
| LifNeuronBase | A leaky-integrate-and-fire (I&F) neuron |
| LinearNeuron | This class implements a neuron which just adds up all its inputs (synapses and analog messages) in a linear fashion |
| LinearPoissonNeuron | Linear Poisson Neuron as in (Gütig et al., 2003) with refractory period |
| LocalDelayMap | Spike routing table for scheduling of spikes within one single thread engine |
| LogNormalDistribution | Log-normal distribution |
| MersenneTwister11213b | |
| MersenneTwister19937 | |
| MPIAllToAllCommunicator | Abstract mpi all-to-all Communicator used for distributed mpi spike exchange |
| MPIAllToAllCommunicatorFactory | Factory class used to create any of the available different mpi all-to-all exchange communicators |
| MPIBufferSlicer | |
| MPICommHandle | |
| MPIDefaultAllToAllCommunicator | A specialization of MPIAllToAllCommunicator which implements the all-to-all exchange algorithm which uses the MPI_Alltoallv function for the exchange |
| MPIExchangeBlocksInfo | |
| MPIInputBuffer | |
| MPIInputBufferVector | |
| MPIInputSpikeBuffer< T > | Buffer class which holds the received serialized spike data from some other node via MPI |
| MPIInputSpikeBufferElement | Represents one element from MPIInputSpikeBuffer. Holds information about one occured spike |
| MPIInputSpikeBufferIterator< T > | Convenient iterator-like interface to MPIInputSpikeBuffer |
| MPIInputSpikeBufferVector< T > | An Array of MPIInputSpikeBuffers |
| MPIMessageSpec | |
| MPIOutputBuffer | |
| MPIOutputBufferVector | An Array of MPIOutputBuffers |
| MPIOutputSpikeBuffer< T > | Buffer holding the outgoing spikes to be dispatched to some other node in the next simulation cycle via MPI |
| MPIOutputSpikeBufferVector< T > | An Array of MPIOutputSpikeBuffers |
| MPISynchroShuffleAllToAllComm | Specialization of MPIAllToAllCommunicator which implements a blocking version of the Synchronuous Shuffle Exchange algorithm presented in [1] |
| MTAnalogMessageCreator | |
| MTDistributedCycledAnalogMsgDispatcher | |
| MTDistributedIncomingSpikeScheduler | Multi threaded distributed incoming spike scheduler |
| MTIncomingAnalogMessageDispatcher | |
| MTPropagatedSpikeBuffers | |
| MTSpikeRoutingTables | Container of local delay map data structures, and a SpikeTargetGroupPool object |
| MultipleOutputSpikeSender | |
| MultiThreadAnalogMsgDispatcher | Handles analog message dispatching in multi-thread scenario |
| MultiThreadNetwork | Network which encapsulates a multi-threaded simulation in one process on a multi-processor machine |
| MultiThreadSimEngine | Simulation Engine for a multi-thread simulation |
| MultiThreadSpikeScheduler | Spike scheduler for a multi-thread simulation |
| NeuroMLImporter | |
| NodeLocalMultiTargetDelayMap | |
| NormalDistribution | Normal distribution |
| PCSIM::NotFoundException | |
| PCSIM::ObjectRegistryException | |
| odeiv::ODESystem | |
| ODESystemBasedSpikingNeuron | |
| OneToOneWiringMethod | Simple implementation of WiringMethod which build a one-to-one connection between corresponding SimObject's in the SimObjectPopulation's |
| OnlineAverager | |
| OnlineHistogramGenerator | |
| OUGenerator | |
| OUNoiseResponse | |
| OUNoiseSynapse | |
| OutgoingAnalogMPIBufferSourcesSet | |
| PCSIMParserEnvironment | |
| PCSIMSpecificNeuroMLParserBase | |
| PinkGenerator | TODO |
| PlainConnectionDecisionPredicate | Predicate which works for populations of class SimObjectPopulation and classes derived from it |
| PlainConnObjectValueGenerator | Value generator which works for populations of class SimObjectPopulation and classes derived from it |
| PlainPopObjectValueGenerator | Value generator which works for populations of class SimObjectPopulation and classes derived from it |
| Point2D< T > | |
| Point2DDistance< T > | |
| Point3D< T > | |
| Point3DSet | Arbitray set of points in 3 dimensions (double precision) |
| Point3DSetSpliter | Class which specifies a spliting algorithm to split one Point3DSet set of points into several disjunct subsets |
| PoissonDistribution | Poisson distribution |
| PoissonInputNeuron | |
| PopObjectAttributeFactory | |
| PopObjectFactory | Factory for SimObjects within population |
| PopObjectFactory::FieldGeneratorPair | |
| PopObjectValueGenerator | Customizable generator for SimObject field values |
| PopObjectValueGeneratorSpecialization< P > | Class exposed to python where user defined value genrators can be derived |
| PositionBased2dValueGenerator | |
| PredicateBasedConnections | Implementation of a ConnectionIterator which connects each pair for which the given connection decisions predicate is true |
| PropagatedSpikeBuffer | Schedule/Store spikes to be delivered at a later point in the simulation |
| PropagatedSpikeBuffer::const_iterator | Iterator to loop over the scheduled spikes at a certain delay |
| PropagatedSpikeBuffer::StgNode | Structure which stores the index of the spike target group and a pointer to the next element in various lists |
| PyConnectionDecisionPredicate | Interface for ConnectionDecisionPredicate which allows to implement ConnectionDecisionPredicate's directly in python |
| PySimObjectStub | |
| QuadDistribution | Quadratic distribution |
| quantifier | |
| RandomConnections | Fast implementation of pure random connections with a given connection probability |
| RandomDistribution | Interface for random number distributions |
| RandomDistributionBoostImplementation< boost_dist > | This template allos an easy construction of a RandomDistribution based on a boost::random based distribution |
| RandomEngine | Interface definition for a random number generator |
| RandomEngineBoostImplementation< boost_engine > | Template for easy construction of RandomEngines using boost::random random number generators |
| RandomFixNumberConnections | Fast implementation of random connections with a given connection probability |
| RatioBasedFamilies | Generator which does a random assignment of locations to family IDs |
| RatioBasedSpliter | Splits a Point3DSet into several subsets based on a probability distribution |
| RetinotopicOrientationConnectionPredicate | Predicate for generating retinotopic connections (with orientation tuning) |
| odeiv::RungeKutta2 | |
| odeiv::RungeKutta4 | |
| ScalarField< T > | |
| ScalarFieldImpl< T, is_scalar > | |
| ScalarFieldImpl< T, false > | |
| ScalarFieldImpl< T, true > | |
| SimEngine | Abstract class on which all simulation engines are built |
| SimEngine::ID | |
| SimEngineAdvanceJob | Implements the abstract ThreadPoolJob interface for the purpose of starting SingleThreadSimEngine-s in separate threads taken from a ThreadPool |
| SimEngineInitializeJob | |
| SimEngineResetJob | |
| SimilarAttributeConnectionPredicate | Predicate to test ConnectionDecisionPredicate based on SimObject Attributes |
| SimNetwork | |
| SimObject | Base class for all objects to simulate |
| SimObject::BlockAllocator | Class for memory management of SimObjects |
| SimObject::ID | Class containing all the id's necessary to uniquely identify a simulation object |
| SimObjectArrayFactory | |
| SimObjectAttributes | Set of attributes which can be associated to SimObject's by using the AugmentedSpatialPopulation |
| SimObjectAttributesDefinition | Hold the definition of a set of attributes |
| SimObjectCloneFactory< T > | This class provides the functionality for cloning SimObject instances |
| SimObjectFactory | This class provides the interface for creating SimObject instances |
| SimObjectIDLessThan | |
| SimObjectIDSortedVector | |
| SimObjectInformation | |
| SimObjectPool | Container for all elements in the simulation |
| SimObjectPool::SimObjectIterator | Iterator for iterating over the advancable objects in the pool |
| SimObjectPopulation | Simple population of SimObjects |
| SimObjectRegistry | Class for registering simulation object classes |
| SimObjectRegistry::FirstIndexOf | |
| SimObjectVariationFactory | Randomized generation of SimObjects |
| SimObjectVariationFactory::FieldRngPair | |
| SimParameter | Structure which encapsulates all global simulation parameters |
| SimpleAllToAllWiringMethod | Standard implementation of wiring up two populations of SimObject's |
| SimpleNonRepeatRandomNG | |
| SimpleRandomNumberGenerator | |
| SimpleScalingSpikingSynapse | |
| SimProgressBar | |
| SingleOutputSpikeSender | |
| SingleThreadAnalogMsgDispatcher | Dispatcher of local analog messages (within one thread) |
| SingleThreadNetwork | Network which can only be run by one thread |
| SingleThreadSimEngine | Simulation engine running in a single thread of execution |
| SingleThreadSpikeScheduler | Class implementing the SpikeScheduler abstract class for the single threaded case |
| odeiv::Solver | |
| SpatialConnectionDecisionPredicate | Predicate which works for populations of class SpatialSimObjectPopulation and classes derived from it |
| SpatialConnObjectValueGenerator | Value generator which works for populations of class SpatialSimObjectPopulation and classes derived from it |
| SpatialFamilyIDGenerator | Base class for generating several different families of objects (created by different factories) into one population |
| SpatialFamilyPopulation | This class associates a family ID and a location in 3D space with each simulation object in the population |
| SpatialObjectPopulation | Population of SimObject's with associated locations in 3D space |
| SpatialPopObjectValueGenerator | Value generator which works for populations of class SpatialSimObjectPopulation and classes derived from it |
| SpatialSimObjectPopulation | Population of SimObject's with associated locations in 3D space |
| SphereConnectionPredicate | Predicate for connections within a sphere with given radius |
| SpikeBuffer | Stores a sequence of spikes. Provides a cutoff routine which erases spikes older then some time point |
| SpikeEvent | Information about the spike time |
| SpikeOutputPort | |
| SpikeScheduler | Abstract class on which all spike schedulers are built |
| SpikeSender | |
| SpikeTargetGroupPool | |
| SpikeTargetGroupPool::SpikeTarget | |
| SpikeTimeRecorder | |
| SpikingInputNeuron | A spiking neuron which emits a predefined spike train |
| SquarePulseSpikeResponse | |
| STAnalogMessageCreator | |
| StaticAnalogSynapse | |
| StaticCondAlphaSynapse | |
| StaticCondDoubleExpSynapse | |
| StaticCondExpSynapse | |
| StaticCurrAlphaSynapse | |
| StaticCurrDoubleExpSynapse | |
| StaticCurrExpSynapse | |
| StaticCurrSquarePulseSynapse | |
| StaticGABAAlphaSynapse | |
| StaticGABADoubleExpSynapse | |
| StaticGABAExpSynapse | |
| StaticGlutamateAlphaSynapse | |
| StaticGlutamateDoubleExpSynapse | |
| StaticGlutamateExpSynapse | |
| StaticHomeostaticCurrentSynapse | |
| StaticHomeostaticSynapse | |
| StaticInfPSRCurrAlphaSynapse | |
| StaticIzhiStdpSynapse | NEEDS TO BE TESTED |
| StaticNMDAAlphaSynapse | |
| StaticNMDADoubleExpSynapse | |
| StaticNMDAExpSynapse | |
| StaticNonLinGABAExpSynapse | |
| StaticSpikingSynapse | |
| StaticStdpCondExpSynapse | |
| StaticStdpSquareSynapse | |
| StaticStdpSynapse | Static synapse implementing STDP plasticity |
| STDistributedIncomingSpikeScheduler | Single threaded distributed incoming spike scheduler |
| odeiv::Stepper | |
| SubSpaceConstraint | Interface for definint constraints on 3D spaces |
| TargetNodesMap | |
| ThreadPool | |
| ThreadPoolJob | |
| ThreadSpecificRandomDistribution< Dist > | |
| ThreadSpecificRandomEngine | |
| Time | |
| PCSIM::TimeException | |
| PCSIM::TimeRangeException | |
| TriangleDistribution | Triangle distribution |
| UniformDistribution | Uniform distribution in the interval [a,b) |
| UniformIntegerDistribution | Uniform distributed integers in the range [a,b] |
| Volume2DSize | |
| Volume3DSize | |
| WiringMethod | Interface for connecting populations of SimObject's |
| WiringMethodSelector | Factory for available WiringMethod's |
| WorkerMainLoop | |
| WorkerState | |
